PYTHIA Tool Portal

 

Biotechnology HPC Software Applications Institute

Introduction

This portal collects databases and in silico prediction tools in support of chemical and assay data storage for drug development, pharmacological assessments, and toxicity predictions of chemicals. Based on the chemical structure of a compound these systems provide a range of machine learning-based predictions for absorption, distribution, metabolism, excretion, and toxicity properties. Database systems are access controlled, in silico tools are enabled for public access.

DATABASES IN SILICO TOOLS
Chemoinformatics

The Chemoinformatics System is designed around a core set of informatics capabilities that provide a platform for capturing and manipulating chemical data

ToxPanel

ToxPanel is a web-based platform to predict liver and kidney injury phenotypes from sequencing data of toxicant exposed animals or cell cultures

ToxProfiler

ToxProfiler is a web-based platform to predict toxic liability of a compound against 64 toxicity targets, providing an in silico safety screen for chemicals

ultra-HTS

ultra-High Throughput Screening (uHTS) collates countermeasure screening data based on the Molecular Libraries Small Molecule Repository (MLSMR)

ADMET

The vNN-ADMET webserver is an online platform to predict absorption, distribution, metabolism, excretion, and toxicity (ADMET) properties from chemical structures

Toxidrome-AI

The Toxidrome profiling tool provides AI-based computational identification of chemicals that cause different toxidromes

INATS

The Improved Nerve Agent Treatment System (INATS) Database stores assay screens of chemicals assessed for their potential to reverse the effects of nerve agents

MONSTROUS

This systems provides a small molecule profiling tool to detect inhibitors as well as substrates for 12 FDA-identified transporter proteins important for drug design

AVOID

The Adverse effects Of Interacting Drugs Database (AVOID-DB) provides potential adverse health effects when combining FDA approved drugs

BARD

The BioAssay Repository Database captures and stores chemical and toxicity screening data to provide integrated chemical queries with AI-prediction models